BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B02LP1|AL426464
(572 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 790 0.0
>3x_Contig924
Length = 2007
Score = 790 bits (390), Expect = 0.0
Identities = 421/439 (95%)
Strand = Plus / Plus
Query: 1 ataataaataaatatctcttcttttawgtactactcatctatatgttatatcttttttag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1563 ataataaataaatatctcttcttttatgtactactcatctatatgttatatcttttttag 1622
Query: 61 attgtaarrknacatctcctatattaamattatttttaatataatttaaaatttttatat 120
||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1623 attgtaaaattacatctcctatattaaaattatttttaatataatttaaaatttttatat 1682
Query: 121 ctttagaagttacaacaacagaaatatcacttctttttattaaaataaatgaacctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 ctttagaagttacaacaacagaaatatcacttctttttattaaaataaatgaacctttac 1742
Query: 181 cttcaaaaaatcctacaaatcattctaaaaatttttgatcaggaacagaatttataggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 cttcaaaaaatcctacaaatcattctaaaaatttttgatcaggaacagaatttataggtt 1802
Query: 241 tmaattctttatattttaaattaaattcatcaaaataaaatttatcttgattaaattcta 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 taaattctttatattttaaattaaattcatcaaaataaaatttatcttgattaaattcta 1862
Query: 301 aatttttaaatgaagataatcataaatyaatattatatttatmatcataaatyactatat 360
|||| |||||||||||||||| || |||||||||||||| ||||||||| |||||||
Sbjct: 1863 aattgttaaatgaagataatcggggatgaatattatatttataatcataaattactatat 1922
Query: 361 aamahggcatagaaaacaaatgttggtataamacagggtcaccaccacctgctacttcga 420
|| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1923 aaaatggcatagaaaacaaatgttggtataaaacagggtcaccaccacctgctacttcga 1982
Query: 421 agaatgaagtattgaagtt 439
|||||||||||||||||||
Sbjct: 1983 agaatgaagtattgaagtt 2001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5752
Number of Sequences: 1807
Number of extensions: 5752
Number of successful extensions: 161
Number of sequences better than 1.0e-20: 1
length of query: 572
length of database: 10,358,551
effective HSP length: 16
effective length of query: 556
effective length of database: 10,329,639
effective search space: 5743279284
effective search space used: 5743279284
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)